Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911612.1_cds_XP_016461614.1_54912
CDS Infomation

[gene=LOC107784931] [db_xref=GeneID:107784931] [protein=uncharacterized protein LOC107784931 isoform X2] [protein_id=XP_016461614.1] [location=complement(join(38200..38738,38992..39085,39186..39265,39850..39901,39991..40148,40272..40362,40449..41624))] [gbkey=CDS]
Sequence

ATGGATAGTTTCAGTGATGATGATGAGGAAGGAGAATGTCAATTTTTCGATGCCCCAGAT
ACTATTTCCCAGGTATCTGATATCAGCACTCGGATTCCCAAATCTATTGACAATGATGCC
AGCTACCAGTACGATATGTGGGTTAGAACTCCCAGAAGTGTTGGAGAGCGGCGTAGGAAA
TTCCTTAGTCGGATGGGCTTAAGTGTGAATGGAATGTCTGGAGAAGATCCAGTAGATTTA
TGCAGAAGCTCCGAATTTGATTTCTCTACTGGAGAGATTGAAAGAATAATGGAGAGTAGT
GGAGCCGTTTTACGGTCTTCAATTTTTAAGGACGAATTATCATCTTACCGGTCTGGATTG
TGTGGGGAAGCTTTGGGTTTATCTAACAATTTGGGTTCAAATGGGAACTACTTATGTAGA
AGTGGGAATGGTGATAGTGGAGTAGGATGCAGTGTTCATGTACATGTTGAGGCAGAGAAT
GGCCAGCAAAGTAATAACAGAGCTGTCAGATTGGAACGACTGCTAATGTCTCGCGAGCCT
GAGAACTCTCCATGTATGTCCCCCGTGATTGGGAAACTTGGACACGGAGAACTGCATAAA
AATGGAAACTCTCCGAGGAAACTGAATGGAGTTAAGAGTCGGTTATTAAGTAGGCTACGG
TCATTTACATGTGTCGCAAATGGCGAAGGGAAATGTCATGATTTGACGGACAACAGTTCC
GACCTTGTTCAGAGGTCTAGAGCTCAGAGGGTTAAGGTTCGCCATTGTAGGAAGCGGCTA
AAGGAACTCTCTGCTCTTTTCATGGGGCAAGATATCCAGGCTCACGAGGGTTCAATTTTA
ACTATGAAATTCAGTTTTGATGGGCAGTACCTAGCTAGTGCTGGTGAAGATAAGATTGTG
CGGGTGTGGAAAGTGGTTGAAGATGAGAGATCCAATGAAATTGATATTCCAGAGTTGGAT
CCTTCGTGTATGTATTTCACAGTGAATCATCTTTCTCAACTGGCTCCGATGGCGACAGAG
AAAGACAGAATTAATAAGTTGAAGGGCCTGAAGAAAACAACAGACTCGGCCTGTGTCATT
TTCCCCCCAAGGGTCTTCCGAATTCTGGAAAAACCACTGCATGTGTTCCAAGGGCATACT
GGGGAGATATTGGATCTTTCATGGTCAAAGAATAATTGTTTGCTCTCATCATCAACTGAC
AAAACTGTTCGTCTGTGGCAAGTTGGACATGATCTGTGCCTCAGAGTTTTTTCACATAGT
AATTATGTGACTTGCATACAGTTTAACCCCGTGAATGATGAATACTTCATCAGTGGATCA
ATAGACGGGAAAGTTCGAATTTGGGCCGTTAACAGCTGTCAAGTATTGGATTGGACTGAT
ATCAGAGACATAGTGACTGCTGTTTCCTATCGTCCTGATGGAAAGGGTGGGATTATTGGC
TCTATGGCAGGCGCTTGCCGTTTTTTCAATGTAGAAGGTCATGAGATCCATTTAGAGGAG
CAGATGTGCTTGGCCAATAAAAAGAAGTCAATTTGCAAAAGGATTACTGGCTTTCAGTTT
CTGCCGCAAGACCCATCTAAAGTAATGGTTACTTCTGCTGACTCTCATGTCAGAATCCTA
GATGGCATCAATGTGATCGGCAAGTACAAAGGCCAGCGAAATGCAGGAAACCATCTCTCT
GCCACTTTCACCTCAGATGGGAAGCATATTATCTCTGCATCTGAAGATTCTAATGTCTAC
GTATGGAACTGTGACATTCGCAAAGATGATTATGTTTCGCAACCTAAAGTGGTGAGGTCA
TCTGAGTTCTTCTCCAGTGATGTTTCCATTGCAATACCTTGGTCCGGCTTGAAAACTGTA
AATCCAGATAATGGATGGCACTCAGAGGGAGGACTAAGTCAAAATCCAAATAGTCTATTA
CCCTTCATGGCCTCTCCTTATCTTTCCTTGGGATGTGAATTGTTCCTTGAGGCAATTCCA
AAGGGATCAGCAACCTGGCCTGAAGAGAAGCTTCCCGTGTCAAGTCCTCGGTCTGTGTCT
TCTCGGATGTGCAGATCTGAATACAAACTTCTAAAAAGTTCTTGCCAGAGTTCATCCAAT
TCTCATGCTTGGGGTTTAGTTATTGTTACTGCAGGCTACGATGGGCGAATAAGGTCATTC
CATAATTATGGATTGCCTCTGCCACTTTGA

Peptide Sequence

PEP ID

XP_016461614.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107784931 isoform X2 [Nicotiana tabacum]
Sequence

MDSFSDDDEEGECQFFDAPDTISQVSDISTRIPKSIDNDASYQYDMWVRTPRSVGERRRK
FLSRMGLSVNGMSGEDPVDLCRSSEFDFSTGEIERIMESSGAVLRSSIFKDELSSYRSGL
CGEALGLSNNLGSNGNYLCRSGNGDSGVGCSVHVHVEAENGQQSNNRAVRLERLLMSREP
ENSPCMSPVIGKLGHGELHKNGNSPRKLNGVKSRLLSRLRSFTCVANGEGKCHDLTDNSS
DLVQRSRAQRVKVRHCRKRLKELSALFMGQDIQAHEGSILTMKFSFDGQYLASAGEDKIV
RVWKVVEDERSNEIDIPELDPSCMYFTVNHLSQLAPMATEKDRINKLKGLKKTTDSACVI
FPPRVFRILEKPLHVFQGHTGEILDLSWSKNNCLLSSSTDKTVRLWQVGHDLCLRVFSHS
NYVTCIQFNPVNDEYFISGSIDGKVRIWAVNSCQVLDWTDIRDIVTAVSYRPDGKGGIIG
SMAGACRFFNVEGHEIHLEEQMCLANKKKSICKRITGFQFLPQDPSKVMVTSADSHVRIL
DGINVIGKYKGQRNAGNHLSATFTSDGKHIISASEDSNVYVWNCDIRKDDYVSQPKVVRS
SEFFSSDVSIAIPWSGLKTVNPDNGWHSEGGLSQNPNSLLPFMASPYLSLGCELFLEAIP
KGSATWPEEKLPVSSPRSVSSRMCRSEYKLLKSSCQSSSNSHAWGLVIVTAGYDGRIRSF
HNYGLPLPL

Transcript Sequence

Gene sequence data has not been registered.